Mass Spectrometry

Fragmentation - Cyclic Alkanes


The fragmentation patterns of cycloalkanes may show mass clusters arranged in a homologous series, as in the alkanes. However, the most significant mode of cleavage of the cycloalkanes involves the loss of ethene from the parent molecule or from intermediate radical-ions. Additionally, if the cycloalkane has a side chain, loss of that side chain is also a favorable mode of fragmentation. Figure 12 provides the mechanism for the fragmentation for cyclopentane. The mass spectrum of cyclopentane (Figure 13) has an intense peak at m/e = 42 due to the loss of ethene.

Figure 12. Mechanism of fragmentation for cyclopentane.

Mechanism of fragmentation for cyclopentane.

Figure 13. Mass spectrum for cyclopentane.

Mass spectrum for cyclopentane.

In order for cycloalkanes to fragment, two carbon-carbon bonds must be broken. This process may require a significant amount of time (relative to the amount of time it takes an ion to reach the detector in a mass spectrometer), therefore, a significant amount of the molecular ion will reach the detector resulting in a large molecular ion peak.

Cycloalkanes tend to cleave in CnH2n+, CnH2n-1+, and CnH2n-2+ fragments. The larger number of even numbered mass fragments of cycloalkanes helps to distinguish this functional group from the acyclic alkanes.


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